[AZ-485] [AZ-486] Cycle 1 docs refresh (Step 13)

Phase B cycle 1 was a structural refactor only: F4 (barrel imports +
STC-ARCH-01) and F7 (endpoint builders + STC-ARCH-02). This commit
brings docs in line with source after the cycle, no code changes.

Module docs (12 consumers): swap every /api/<service>/... literal in
code snippets and integration tables for the matching endpoints.*
builder; note the barrel import migration in Dependencies.

New module doc: src__api__endpoints.md (public surface, F4 barrel
re-export note, STC-ARCH-02 enforcement, contract-test reference).

Architecture compliance baseline: mark F4 + F7 CLOSED with commit
hashes (23746ec, 8a461a2).

01_api-transport component description: add endpoints.ts + barrel to
Internal Interfaces, close the F7 caveat, extend Module Inventory.

ripple_log_cycle1.md: Task Step 0.5 reverse-dep analysis records the
import-graph closure (no extra docs needed beyond the direct set).

Carry-over reports landed alongside the docs:
- test_run_report_phase_b_cycle1.md (Step 11 outcome)
- implementation_report_refactor_phase_b_cycle1.md (cycle summary)

State file: trimmed to the autodev <30-line target; Steps 14 + 15
recorded as SKIPPED with rationale (no security or perf surface
changed in this cycle); pointer moved to Step 16 (Deploy).

Co-authored-by: Cursor <cursoragent@cursor.com>

_docs/_autodev_state.md

@@ -2,57 +2,28 @@
 
 ## Current Step
 flow: existing-code
-step: 10
-name: Implement
-status: in_progress
+step: 16
+name: Deploy
+status: not_started
 sub_step:
-  phase: 7
-  name: batch-10-cycle1-az486-complete
-  detail: "AZ-486 (F7 endpoint builders + STC-ARCH-02) implemented + reviewed; batch_10_report saved; archive done; awaiting user approval to commit and then auto-chain to Step 11"
+  phase: 0
+  name: awaiting-invocation
+  detail: ""
 retry_count: 0
 cycle: 1
 tracker: jira
-step_4_5_glossary_vision: confirmed
-step_2_baseline_routing: per-finding-recommended (option A)
-step_3_results_report_authoring: agent (option A)
-step_3_ac_gap_handling: rollback-to-6c (option A)
 
 ## Notes
-- Phase A baseline cycle. Step 1 (Document) complete; see
-  `_docs/02_document/state.json`, `FINAL_report.md`, `architecture.md`,
-  `glossary.md`, plus `_docs/01_solution/solution.md` and
-  `_docs/00_problem/{problem,acceptance_criteria,restrictions,security_approach}.md`.
-- Implement-skill batch reports at
-  `_docs/03_implementation/batch_0{1..9}_report.md` + `batch_10_report.md`
-  (batch 09 = AZ-485 cycle-1 batch-1; batch 10 = AZ-486 cycle-1 batch-2).
-- Cumulative reviews PASS_WITH_WARNINGS at
-  `_docs/03_implementation/cumulative_review_batches_01-03_report.md`,
-  `_docs/03_implementation/cumulative_review_batches_04-06_cycle1_report.md`,
-  `_docs/03_implementation/cumulative_review_batches_07-08_cycle1_report.md`
-  (cycle close — Phase A wrap, no batch 9).
-- Phase B cycle 1 closed (2 batches, both AC + static + fast green):
-  - AZ-485 (F4 — Public API barrels + STC-ARCH-01, 5 pts) — committed 23746ec
-  - AZ-486 (F7 — Endpoint builders + STC-ARCH-02, 5 pts) — batch 10 done,
-    uncommitted, awaiting user approval.
-- Step 10 (Implement) batch 10 (AZ-486) done:
-  - 2 new files (`src/api/endpoints.ts` 25 builders, `src/api/endpoints.test.ts` 36 cases).
-  - 1 barrel update (`src/api/index.ts` re-exports `endpoints`).
-  - 13 production files migrated to `endpoints.*` (admin, annotations,
-    flights, settings, dataset, auth, client, FlightContext,
-    DetectionClasses, CanvasEditor, VideoPlayer, MediaList,
-    AnnotationsSidebar, AnnotationsPage).
-  - `scripts/check-arch-imports.mjs` extended with `--mode=api-literals`
-    (STC-ARCH-02) alongside `--mode=arch-imports` (STC-ARCH-01);
-    `scripts/run-tests.sh` wires both modes.
-  - `tests/architecture_imports.test.ts` extended with 6 STC-ARCH-02 cases
-    (single/double/template-literal fail paths, *.test.* exemption,
-    line-comment skip, migrated-codebase pass).
-  - `_docs/02_document/module-layout.md` `01_api-transport` Public API now
-    lists `endpoints`; Verification Needed item #3a records F7 resolution.
-  - Test counts: 167 → 209 PASS / 13 SKIP / 0 FAIL (+42).
-  - Static: 31 / 31 PASS including new STC-ARCH-02.
-- Cumulative code review (K=3): no trigger — Phase B cycle 1 had only 2
-  batches (9, 10).
-- Next on commit of batch 10: auto-chain to Step 11 (Run Tests) via
-  `test-run/SKILL.md`. Final cycle-1 implementation report (`implementation_report_phase_b_cycle1.md`) is written at that point per
-  implement skill Step 16 handoff rule.
+- Cycle 1 (Phase B) refactor cycle: F4 (AZ-485, `23746ec`) and F7
+  (AZ-486, `8a461a2`) closed.
+- Step 13 (Update Docs) DONE in working tree, NOT YET COMMITTED. User
+  skipped the commit gate; 12 module docs + new `src__api__endpoints.md`
+  + `01_api-transport/description.md` + ripple log + 2 cycle reports
+  pending review. Commit subject for when ready:
+  `[AZ-485] [AZ-486] Cycle 1 docs refresh (Step 13)`.
+- Step 14 (Security Audit) SKIPPED — cycle 1 was structural refactor
+  only; URL strings character-identical to pre-refactor (pinned by
+  `endpoints.test.ts`), no new auth / wire / permission surface.
+- Step 15 (Performance Test) SKIPPED — same rationale; no
+  latency-/throughput-relevant code paths changed.
+- Next: Step 16 (Deploy) — destructive; awaiting user decision.